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Creators/Authors contains: "Bourbonnais, Annie"

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  1. Forested watersheds are instrumental in providing purified and reliable water to millions of people worldwide. The changing climate has increased the frequency and severity of global fire events. Forested watersheds and their ecosystem functions are greatly disrupted during fire activity. Postfire concerns in forested watersheds include unpredictable and potentially simultaneous alterations in source water quality and hydro-biogeochemical processes. The degree of fire severity can complexly modify water quality through the production of fire-transformed constituents on the burned forest floor (i.e., nutrients, metal(loid)s, dissolved organic matter, and the formation of disinfection byproducts). Correspondingly, fire severity and postfire rainfall patterns can refine hydro-biogeochemical processes that influence the transport of the fire-transformed constituents (i.e., vegetation function, soil structure, hydrological pathways, and microbial communities). Postfire alterations to water quality and hydro-biogeochemical processes introduce further complexity with varying temporal influence, which ranges from months to decades. As postfire water quality and watershed response research progresses, it is essential to homogenize interdisciplinary expertise to bridge knowledge gaps between fields ranging from forest ecology, hydrology, microbiology, and geochemistry. A multidisciplinary approach in wildfire research will facilitate a comprehensive perception of the diverse water quality risks associated with fire activity and mitigate fire concerns on a global level. 
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    Free, publicly-accessible full text available July 29, 2026
  2. Abstract. Despite long-standing interest in the biogeochemistry of the Santa Barbara Basin (SBB), there are no direct rate measurements of different nitrogen transformation processes. We investigated benthic nitrogen cycling using in situ incubations with 15NO3- addition and quantified the rates of total nitrate (NO3-) uptake, denitrification, anaerobic ammonia oxidation (anammox), N2O production, and dissimilatory nitrate reduction to ammonia (DNRA). Denitrification was the dominant NO3- reduction process, while anammox contributed 0 %–27 % to total NO3- reduction. DNRA accounted for less than half of NO3- reduction except at the deepest station at the center of the SBB where NO3- concentration was lowest. NO3- availability and sediment total organic carbon content appeared to be two key controls on the relative importance of DNRA. The increasing importance of fixed N retention via DNRA relative to fixed N loss as NO3- deficit intensifies suggests a negative feedback loop that potentially contributes to stabilizing the fixed N budget in the SBB. Nitrous oxide (N2O) production as a fraction of total NO3- reduction ranged from 0.2 % to 1.5 %, which was higher than previous reports from nearby borderland basins. A large fraction of NO3- uptake was unaccounted for by NO3- reduction processes, suggesting that intracellular storage may play an important role. Our results indicate that the SBB acts as a strong sink for fixed nitrogen and potentially a net source of N2O to the water column. 
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  3. In this paper, we present a system for measuring water quality, with a focus on detecting and predicting Harmful Cyanobacterial Blooms (HCBs). The proposed approach includes stationary multi-sensor stations, Autonomous Surface Vehicles (ASVs) collecting water quality data, and manual deployments of vertical water sampling together with vertical water quality sensor data collection, in order to monitor the health of the lake and the progress of different types of algal blooms. Traditional water monitoring is performed by manual sampling, which is limited both in the spatial and the temporal domain. The proposed method will expand the range of measurements while reducing the cost. Human sampling is still included in order to provide a base of comparison and ground truth for the automated measurements. In addition, the collected data, over multiple years, will be analyzed to infer correlations between the different measured parameters and the presence of blooms. A detailed description of the proposed system is presented together with data collected during our first sampling season. 
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  4. The field of oceanography is transitioning from data-poor to data-rich, thanks in part to increased deployment ofin-situplatforms and sensors, such as those that instrument the US-funded Ocean Observatories Initiative (OOI). However, generating science-ready data products from these sensors, particularly those making biogeochemical measurements, often requires extensive end-user calibration and validation procedures, which can present a significant barrier. Openly available community-developed and -vetted Best Practices contribute to overcoming such barriers, but collaboratively developing user-friendly Best Practices can be challenging. Here we describe the process undertaken by the NSF-funded OOI Biogeochemical Sensor Data Working Group to develop Best Practices for creating science-ready biogeochemical data products from OOI data, culminating in the publication of the GOOS-endorsed OOI Biogeochemical Sensor Data Best Practices and User Guide. For Best Practices related to ocean observatories, engaging observatory staff is crucial, but having a “user-defined” process ensures the final product addresses user needs. Our process prioritized bringing together a diverse team and creating an inclusive environment where all participants could effectively contribute. Incorporating the perspectives of a wide range of experts and prospective end users through an iterative review process that included “Beta Testers’’ enabled us to produce a final product that combines technical information with a user-friendly structure that illustrates data analysis pipelines via flowcharts and worked examples accompanied by pseudo-code. Our process and its impact on improving the accessibility and utility of the end product provides a roadmap for other groups undertaking similar community-driven activities to develop and disseminate new Ocean Best Practices. 
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  5. null (Ed.)
    Nitrous oxide (N 2 O) is a potent greenhouse gas and an ozone destroying substance. Yet, clear step-by-step protocols to measure N 2 O transformation rates in freshwater and marine environments are still lacking, challenging inter-comparability efforts. Here we present detailed protocols currently used by leading experts in the field to measure water-column N 2 O production and consumption rates in both marine and other aquatic environments. We present example 15 N-tracer incubation experiments in marine environments as well as templates to calculate both N 2 O production and consumption rates. We discuss important considerations and recommendations regarding (1) precautions to prevent oxygen (O 2 ) contamination during low-oxygen and anoxic incubations, (2) preferred bottles and stoppers, (3) procedures for 15 N-tracer addition, and (4) the choice of a fixative. We finally discuss data reporting and archiving. We expect these protocols will make 15 N-labeled N 2 O transformation rate measurements more accessible to the wider community and facilitate future inter-comparison between different laboratories. 
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  6. Assessment of the global budget of the greenhouse gas nitrous oxide ( N 2 O) is limited by poor knowledge of the oceanic N 2 O flux to the atmosphere, of which the magnitude, spatial distribution, and temporal variability remain highly uncertain. Here, we reconstruct climatological N 2 O emissions from the ocean by training a supervised learning algorithm with over 158,000 N 2 O measurements from the surface ocean—the largest synthesis to date. The reconstruction captures observed latitudinal gradients and coastal hot spots of N 2 O flux and reveals a vigorous global seasonal cycle. We estimate an annual mean N 2 O flux of 4.2 ± 1.0 Tg N y 1 , 64% of which occurs in the tropics, and 20% in coastal upwelling systems that occupy less than 3% of the ocean area. This N 2 O flux ranges from a low of 3.3 ± 1.3 Tg N y 1 in the boreal spring to a high of 5.5 ± 2.0 Tg N y 1 in the boreal summer. Much of the seasonal variations in global N 2 O emissions can be traced to seasonal upwelling in the tropical ocean and winter mixing in the Southern Ocean. The dominant contribution to seasonality by productive, low-oxygen tropical upwelling systems (>75%) suggests a sensitivity of the global N 2 O flux to El Niño–Southern Oscillation and anthropogenic stratification of the low latitude ocean. This ocean flux estimate is consistent with the range adopted by the Intergovernmental Panel on Climate Change, but reduces its uncertainty by more than fivefold, enabling more precise determination of other terms in the atmospheric N 2 O budget. 
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  7. null (Ed.)